There is, indeed, a spy humongous on the USS Cerritos. Capt. Freeman and Shaxs have gone down to the Pakled planet (which they called "Pakled Planet") to try and negotiate a peace. But then a "prisoner" from the planet "escapes" to the Cerritos and asks for "asylum" – and also schematics for the ships defensive capabilities.
Meanwhile, Mariner, Tendi, and Rutherford are on Anomaly Consolidation Duty. Basically, they are collecting dangerous science trash that senior staff has collected on away missions. The results are... messy.
Also meanwhile, Rutherford gets recruited into "The Red Shirts," and club of enterprising young officers who see to help each other get promoted through the ranks. If it seems like a cult, or just a bad idea, it is.
So, you know, the usual.
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